Package: UpDown 1.2.3

UpDown: Detecting Group Disturbances from Longitudinal Observations

Provides an algorithm to detect and characterize disturbances (start, end dates, intensity) that can occur at different hierarchical levels by studying the dynamics of longitudinal observations at the unit level and group level based on Nadaraya-Watson's smoothing curves, but also a shiny app which allows to visualize the observations and the detected disturbances. Finally the package provides a dataframe mimicking a pig farming system subsected to disturbances simulated according to Le et al.(2022) <doi:10.1016/j.animal.2022.100496>.

Authors:Tom Rohmer [aut, cre], Vincent Le [aut], Ingrid David [aut]

UpDown_1.2.3.tar.gz
UpDown_1.2.3.zip(r-4.7-any)UpDown_1.2.3.zip(r-4.6-any)UpDown_1.2.3.zip(r-4.5-any)
UpDown_1.2.3.tgz(r-4.6-any)UpDown_1.2.3.tgz(r-4.5-any)
UpDown_1.2.3.tar.gz(r-4.7-any)UpDown_1.2.3.tar.gz(r-4.6-any)
UpDown_1.2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
UpDown/json (API)

# Install 'UpDown' in R:
install.packages('UpDown', repos = c('https://tomrohmer.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tomrohmer/updown/issues

Datasets:
  • PigDisturbance - Non-observable information about the disturbances occuring in the 'PigFarming' dataset
  • PigFarming - Simulated longitudinal phenotypes that mimics a pig-farming dataset subsected to disturbances

On CRAN:

Conda:

2.70 score 1 stars 1 scripts 235 downloads 2 exports 78 dependencies

Last updated from:3d8f71042d. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK179
source / vignettesOK211
linux-release-x86_64OK183
macos-release-arm64OK258
macos-oldrel-arm64OK217
windows-develOK181
windows-releaseOK109
windows-oldrelOK145
wasm-releaseOK131

Exports:UpDownUpDownApp

Dependencies:askpassbase64encbslibcachemclicommonmarkcpp11crosstalkcurldata.tabledigestdplyrevaluatefarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonlitekernlabknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmclustmemoisemimemixtoolsnlmeopensslotelpillarpkgconfigplotlypromisespurrrR6rappdirsRColorBrewerRcpprlangrmarkdownS7sassscalessegmentedshinysourcetoolsstringistringrsurvivalsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableyaml